| Bolter Island-Mississippi River |
| Callaway Fork |
| City of Alton-Mississippi River |
| City of Wood River-Mississippi River |
| Cowmire Creek-Missouri River |
| Cuivre Island-Mississippi River |
| Cuivre River |
| Dogtown Hollow-Mississippi River |
| Dubois Creek-Missouri River |
| Duckett Creek-Missouri River |
| Femme Osage Creek |
| Greens Chute-Missouri River |
| Groshong Branch-Cuivre River |
| Headwaters Peruque Creek |
| Indian Camp Creek |
| Labadie Creek-Missouri River |
| Lower Big Creek |
| Lower Charrette Creek |
| Lower Dardenne Creek |
| Maline Creek-Mississippi River |
| Marais Temps Clair-Mississippi River |
| McCoy Creek |
| Middle Charrette Creek |
| Middle Dardenne Creek |
| Outlet Missouri River |
| Peruque Creek |
| Schluersburg Creek-Femme Osage Creek |
| Upper Dardenne Creek |
| Wildhorse Creek-Missouri River |
| <all other values> |